BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006F01LP1|AL425560
(905 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1731 1756 0.0
>3x_Contig1731
Length = 24233
Score = 1756 bits (884), Expect = 0.0
Identities = 901/906 (99%), Gaps = 2/906 (0%)
Strand = Plus / Plus
Query: 1 ataactgtgatggaacctatgcacagttttgcaatagagaaagtaacattgatgatgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1045 ataactgtgatggaacctatgcacagttttgcaatagagaaagtaacattgatgatgttt 1104
Query: 61 ggcatttactaaacgatgatcagttcaacgggagtagatgatcttccgatcaacggaact 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1105 ggcatttactaaacgatgatcagttcaacgggag-agatgatcttccgatcaacggaact 1163
Query: 121 gatttgttagaaactatggatatgtattggaaaagtaacacaggtgatgatgaaagtttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1164 gatttgttagaaactatggatatgtattggaaaagtaacacaggtgatgatgaaagtttg 1223
Query: 181 tgggtacacgaatataataagcacggaacttgtattcgaacattatatccggattgttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1224 tgggtacacgaatataataagcacggaacttgtattcgaacattatatccggattgttat 1283
Query: 241 aaaaaatggggagtggctgggaacagtaagaaacaagcagtttatgattacttcagaatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1284 aaaaaatggggagtggctgggaacagtaagaaacaagcagtttatgattacttcagaatc 1343
Query: 301 gccatgaaattattccatgataaagacacttatcagacattaaagtctgcgggaattgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1344 gccatgaaattattccatgataaagacacttatcagacattaaagtctgcgggaattgaa 1403
Query: 361 ccgagtgtggaaaagagctacaccaaacttgaaatatcgaatgcattaaaagaaggtcac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1404 ccgagtgtggaaaagagctacaccaaacttgaaatatcgaatgcattaaaagaaggtcac 1463
Query: 421 tctggtgaagtagtacacttcttatgtgacagacatggttccttgaaccaaatttggtac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1464 tctggtgaagtagtacacttcttatgtgacagacatggttccttgaaccaaatttggtac 1523
Query: 481 ttccactcattgaagggatccttattaggagaaaaatttgtacctatttctgcgctaccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1524 ttccactcattgaagggatccttattaggagaaaaatttgtacctatttctgcgctaccc 1583
Query: 541 aaaggttctaattgtccggatgataatattaaatggtatccaaaggggcatgttccatcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1584 aaaggttctaattgtccggatgataatattaaatggtatccaaaggggcatgttccatcc 1643
Query: 601 tcttatagacctccaaatggcaaccatcctggtaccaggggtgttgtaagaattggtaac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1644 tcttatagacctccaaatggcaaccatcctggtaccaggggtgttgtaagaattggtaac 1703
Query: 661 ggtaaagggtttctaatcaaaaatggacattggtatttaaagggaa-cccagctaatttc 719
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1704 ggtaaagggtttctaatcaaaaatggacattggtatttaaagggaaccccagctaatttc 1763
Query: 720 ttcttgatagaggcaccatttggaaactattatttgaagamaagaatgggatattgtggt 779
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1764 ttcttgatagaggcaccatttggaaactattatttgaagacaagaatgggatattgtggt 1823
Query: 780 atcgataattctaataaagtgttggcatgtaacaaaaacgttgcycaagccgctcaattc 839
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1824 atcgataattctaataaagtgttggcatgtaacaaaaacgttgcccaagccgctcaattc 1883
Query: 840 gaatatgacgcaaagaaaggttacattggatacaacggagcttatgattggtatgcaamc 899
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1884 gaatatgacgcaaagaaaggttacattggatacaacggagcttatgattggtatgcaacc 1943
Query: 900 aaatat 905
||||||
Sbjct: 1944 aaatat 1949
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6551
Number of Sequences: 1807
Number of extensions: 6551
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 1
length of query: 905
length of database: 10,358,551
effective HSP length: 16
effective length of query: 889
effective length of database: 10,329,639
effective search space: 9183049071
effective search space used: 9183049071
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)